Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 DGCR9-201ENST00000609630 2415 ntBASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 KRT18P36-201ENST00000411618 1276 ntBASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AC005730.2-201ENST00000564549 1184 ntBASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 EEF1DP1-201ENST00000585891 896 ntBASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AC009884.2-201ENST00000603110 324 ntBASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AC009542.2-202ENST00000619004 1067 ntBASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AC068760.1-201ENST00000493579 1953 ntBASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 OR2R1P-201ENST00000441404 914 ntBASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 AC012441.2-201ENST00000444843 739 ntBASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 PFN1P12-201ENST00000455938 534 ntBASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 AC022217.1-201ENST00000521069 738 ntBASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 AC126335.2-201ENST00000623362 4637 ntBASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPF3BQ9BZI7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 CICP20-201ENST00000443330 2801 ntBASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UPF3BQ9BZI7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms