Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC10.89□□□□□ -0.67
VGLL1Q99990 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC10.89□□□□□ -0.67
VGLL1Q99990 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC10.89□□□□□ -0.67
VGLL1Q99990 TDH-203ENST00000531764 1110 ntBASIC10.89□□□□□ -0.67
VGLL1Q99990 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC10.89□□□□□ -0.67
VGLL1Q99990 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC10.89□□□□□ -0.67
VGLL1Q99990 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.89□□□□□ -0.67
VGLL1Q99990 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 INO80C-206ENST00000586489 594 ntTSL 3 BASIC10.89□□□□□ -0.67
VGLL1Q99990 ECM1P1-201ENST00000604092 1279 ntBASIC10.89□□□□□ -0.67
VGLL1Q99990 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC10.89□□□□□ -0.67
VGLL1Q99990 BAP1-211ENST00000615113 489 ntBASIC10.89□□□□□ -0.67
VGLL1Q99990 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
VGLL1Q99990 ETV2-208ENST00000621247 941 ntTSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC10.89□□□□□ -0.67
VGLL1Q99990 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
VGLL1Q99990 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 EML1-203ENST00000334192 4064 ntTSL 5 BASIC10.89□□□□□ -0.67
VGLL1Q99990 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VGLL1Q99990 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC10.88□□□□□ -0.67
VGLL1Q99990 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.88□□□□□ -0.67
VGLL1Q99990 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 AGAP12P-201ENST00000585227 2359 ntBASIC10.88□□□□□ -0.67
VGLL1Q99990 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
VGLL1Q99990 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
VGLL1Q99990 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
VGLL1Q99990 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC10.88□□□□□ -0.67
VGLL1Q99990 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
VGLL1Q99990 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC10.88□□□□□ -0.67
VGLL1Q99990 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC10.88□□□□□ -0.67
VGLL1Q99990 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.88□□□□□ -0.67
VGLL1Q99990 MIR4683-201ENST00000579659 81 ntBASIC10.88□□□□□ -0.67
VGLL1Q99990 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 LINC02560-201ENST00000596379 459 ntBASIC10.88□□□□□ -0.67
VGLL1Q99990 AL096865.1-201ENST00000606796 927 ntBASIC10.88□□□□□ -0.67
VGLL1Q99990 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC10.88□□□□□ -0.67
VGLL1Q99990 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 AC106818.1-201ENST00000623223 3242 ntBASIC10.88□□□□□ -0.67
VGLL1Q99990 AC002472.3-201ENST00000640124 621 ntBASIC10.88□□□□□ -0.67
VGLL1Q99990 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VGLL1Q99990 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
VGLL1Q99990 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC10.88□□□□□ -0.67
VGLL1Q99990 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC10.88□□□□□ -0.67
VGLL1Q99990 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms