Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCC2Q8TAQ2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMARCC2Q8TAQ2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMARCC2Q8TAQ2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SMARCC2Q8TAQ2 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 AC090857.1-201ENST00000527400 390 ntBASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 AC135782.3-201ENST00000562782 2105 ntBASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMARCC2Q8TAQ2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMARCC2Q8TAQ2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
SMARCC2Q8TAQ2 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SMARCC2Q8TAQ2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 HMGA1P1-201ENST00000415560 1062 ntBASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 AC140658.4-201ENST00000561990 352 ntBASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 AL157813.1-201ENST00000612996 587 ntBASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 RCC2P1-201ENST00000452257 1476 ntBASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 AC008132.1-202ENST00000342005 1389 ntBASIC16.64■□□□□ 0.25
SMARCC2Q8TAQ2 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 AL662890.1-201ENST00000396818 632 ntBASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.63■□□□□ 0.25
SMARCC2Q8TAQ2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms