Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AP002353.1-201ENST00000528257 1599 ntBASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 RNMTL1P1-201ENST00000454103 560 ntBASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AC119751.2-201ENST00000504529 210 ntBASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 AC092299.1-201ENST00000632679 757 ntBASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 LINC00115-201ENST00000473798 1317 ntBASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.65□□□□□ -0.06
CDKL3Q8IVW4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 FAM90A7P-201ENST00000382628 1395 ntBASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 FAM90A23P-201ENST00000400136 1395 ntBASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 RNA5SP412-201ENST00000516234 123 ntBASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 AC017083.2-201ENST00000608069 979 ntBASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 MIR6805-201ENST00000615055 62 ntBASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 CICP17-201ENST00000418553 2377 ntBASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDKL3Q8IVW4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms