Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 RN7SL128P-201ENST00000467883 305 ntBASIC15.06■□□□□ 0
NPAS4Q8IUM7 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 AC087203.1-201ENST00000532111 1181 ntBASIC15.06■□□□□ 0
NPAS4Q8IUM7 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NPAS4Q8IUM7 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC15.06■□□□□ 0
NPAS4Q8IUM7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.05■□□□□ 0
NPAS4Q8IUM7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.05■□□□□ 0
NPAS4Q8IUM7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.05■□□□□ 0
NPAS4Q8IUM7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NPAS4Q8IUM7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
NPAS4Q8IUM7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.05■□□□□ 0
NPAS4Q8IUM7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.05■□□□□ 0
NPAS4Q8IUM7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS4Q8IUM7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS4Q8IUM7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS4Q8IUM7 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 AL929302.1-201ENST00000426556 871 ntBASIC15.05■□□□□ -0
NPAS4Q8IUM7 SERPINA7P1-201ENST00000443077 631 ntBASIC15.05■□□□□ -0
NPAS4Q8IUM7 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 AC092903.1-201ENST00000466506 262 ntBASIC15.05■□□□□ -0
NPAS4Q8IUM7 RN7SL351P-201ENST00000469306 248 ntBASIC15.05■□□□□ -0
NPAS4Q8IUM7 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC15.05■□□□□ -0
NPAS4Q8IUM7 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC15.05■□□□□ -0
NPAS4Q8IUM7 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPAS4Q8IUM7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPAS4Q8IUM7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS4Q8IUM7 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPAS4Q8IUM7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.05■□□□□ -0
NPAS4Q8IUM7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
NPAS4Q8IUM7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NPAS4Q8IUM7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.04■□□□□ -0
NPAS4Q8IUM7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NPAS4Q8IUM7 PES1P2-201ENST00000449745 1735 ntBASIC15.04■□□□□ -0
NPAS4Q8IUM7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms