Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC134915.1-201ENST00000426461 574 ntBASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 ALG3P1-201ENST00000508806 1114 ntBASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC093004.1-201ENST00000508850 424 ntBASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC190387.1-201ENST00000551683 408 ntBASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC009407.1-201ENST00000568958 598 ntBASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AL358472.5-202ENST00000641448 1267 ntBASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC108024.1-201ENST00000626286 1721 ntBASIC11.89□□□□□ -0.51
ANKRD55Q3KP44 AC107375.1-201ENST00000564464 2231 ntBASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 AL645937.6-201ENST00000641122 3727 ntBASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 CLUHP2-201ENST00000426660 1303 ntBASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 C1QBPP1-201ENST00000400117 770 ntBASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 ACTBP8-201ENST00000403258 1108 ntBASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 AC002472.2-201ENST00000442739 958 ntBASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 LINC01165-201ENST00000445190 1623 ntBASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ANKRD55Q3KP44 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms