Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SEC61A1P61619 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.6□□□□□ -0.39
SEC61A1P61619 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SEC61A1P61619 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.6□□□□□ -0.39
SEC61A1P61619 AC111170.3-201ENST00000624282 2464 ntBASIC12.6□□□□□ -0.39
SEC61A1P61619 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.6□□□□□ -0.39
SEC61A1P61619 TPM3P8-201ENST00000330554 643 ntBASIC12.6□□□□□ -0.39
SEC61A1P61619 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.6□□□□□ -0.39
SEC61A1P61619 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.6□□□□□ -0.39
SEC61A1P61619 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
SEC61A1P61619 RNA5SP412-201ENST00000516234 123 ntBASIC12.6□□□□□ -0.39
SEC61A1P61619 AC022616.1-201ENST00000518688 554 ntBASIC12.6□□□□□ -0.39
SEC61A1P61619 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC61A1P61619 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC61A1P61619 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.6□□□□□ -0.39
SEC61A1P61619 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SEC61A1P61619 ENPP7P14-201ENST00000621765 1040 ntBASIC12.6□□□□□ -0.39
SEC61A1P61619 AC006453.4-201ENST00000636949 1252 ntBASIC12.6□□□□□ -0.39
SEC61A1P61619 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SEC61A1P61619 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC61A1P61619 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC61A1P61619 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC61A1P61619 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC61A1P61619 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SEC61A1P61619 AHCYP2-201ENST00000430630 1300 ntBASIC12.6□□□□□ -0.39
SEC61A1P61619 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SEC61A1P61619 AP002761.4-201ENST00000565433 3361 ntBASIC12.6□□□□□ -0.39
SEC61A1P61619 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.6□□□□□ -0.39
SEC61A1P61619 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SEC61A1P61619 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.59□□□□□ -0.39
SEC61A1P61619 MIR1908-201ENST00000410394 80 ntBASIC12.59□□□□□ -0.39
SEC61A1P61619 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 AL355994.2-201ENST00000447882 704 ntBASIC12.59□□□□□ -0.39
SEC61A1P61619 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.59□□□□□ -0.39
SEC61A1P61619 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.59□□□□□ -0.39
SEC61A1P61619 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.59□□□□□ -0.39
SEC61A1P61619 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 RN7SL48P-201ENST00000579283 293 ntBASIC12.59□□□□□ -0.39
SEC61A1P61619 MIR4741-201ENST00000579822 90 ntBASIC12.59□□□□□ -0.39
SEC61A1P61619 MIR4538-201ENST00000581377 78 ntBASIC12.59□□□□□ -0.39
SEC61A1P61619 RN7SL219P-201ENST00000582872 296 ntBASIC12.59□□□□□ -0.39
SEC61A1P61619 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.59□□□□□ -0.39
SEC61A1P61619 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms