Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
PDX1P52945 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.85□□□□□ -0.19
PDX1P52945 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
PDX1P52945 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
PDX1P52945 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.85□□□□□ -0.19
PDX1P52945 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.85□□□□□ -0.19
PDX1P52945 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.85□□□□□ -0.19
PDX1P52945 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDX1P52945 AC090502.4-201ENST00000551714 1386 ntBASIC13.84□□□□□ -0.19
PDX1P52945 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
PDX1P52945 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.84□□□□□ -0.19
PDX1P52945 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC13.84□□□□□ -0.19
PDX1P52945 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.84□□□□□ -0.19
PDX1P52945 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 AP000911.2-201ENST00000534330 502 ntBASIC13.84□□□□□ -0.19
PDX1P52945 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 AC027237.1-201ENST00000560942 655 ntBASIC13.84□□□□□ -0.19
PDX1P52945 NUDT4P2-201ENST00000578341 546 ntBASIC13.84□□□□□ -0.19
PDX1P52945 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 AL132780.4-201ENST00000624870 1135 ntBASIC13.84□□□□□ -0.19
PDX1P52945 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.84□□□□□ -0.19
PDX1P52945 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 HSPA7-201ENST00000445535 1927 ntBASIC13.84□□□□□ -0.19
PDX1P52945 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.84□□□□□ -0.19
PDX1P52945 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDX1P52945 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
PDX1P52945 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PDX1P52945 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
PDX1P52945 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
PDX1P52945 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
PDX1P52945 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDX1P52945 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
PDX1P52945 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDX1P52945 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
PDX1P52945 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDX1P52945 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDX1P52945 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDX1P52945 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDX1P52945 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PDX1P52945 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.83□□□□□ -0.2
PDX1P52945 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
PDX1P52945 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.83□□□□□ -0.2
PDX1P52945 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.83□□□□□ -0.2
PDX1P52945 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.83□□□□□ -0.2
PDX1P52945 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDX1P52945 AC092580.1-201ENST00000433998 658 ntBASIC13.83□□□□□ -0.2
PDX1P52945 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.83□□□□□ -0.2
PDX1P52945 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.83□□□□□ -0.2
PDX1P52945 KRT8P1-201ENST00000557533 1207 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms