Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC4.96□□□□□ -1.61
NEBP20929 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC4.96□□□□□ -1.61
NEBP20929 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
NEBP20929 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
NEBP20929 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
NEBP20929 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
NEBP20929 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
NEBP20929 RACGAP1-209ENST00000547905 2190 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 OR5D14-201ENST00000335605 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NEBP20929 AC079987.1-201ENST00000420181 123 ntBASIC4.96□□□□□ -1.62
NEBP20929 PRAMEF32P-201ENST00000431596 1068 ntBASIC4.96□□□□□ -1.62
NEBP20929 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC4.96□□□□□ -1.62
NEBP20929 AC005532.1-203ENST00000447039 626 ntTSL 3 BASIC4.96□□□□□ -1.62
NEBP20929 AL133163.1-201ENST00000459899 949 ntBASIC4.96□□□□□ -1.62
NEBP20929 AC126773.3-201ENST00000562089 893 ntBASIC4.96□□□□□ -1.62
NEBP20929 ZNF430-206ENST00000599548 595 ntTSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC4.96□□□□□ -1.62
NEBP20929 AC137936.2-201ENST00000636329 620 ntBASIC4.96□□□□□ -1.62
NEBP20929 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 AL109618.1-201ENST00000434910 1683 ntBASIC4.96□□□□□ -1.62
NEBP20929 AC020629.1-201ENST00000550858 1650 ntBASIC4.96□□□□□ -1.62
NEBP20929 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 KHSRPP1-201ENST00000427983 1768 ntBASIC4.96□□□□□ -1.62
NEBP20929 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 AC006504.5-208ENST00000588784 2401 ntBASIC4.96□□□□□ -1.62
NEBP20929 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 PCDHB19P-201ENST00000570871 2371 ntBASIC4.96□□□□□ -1.62
NEBP20929 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 AC008038.1-201ENST00000634247 1314 ntBASIC4.96□□□□□ -1.62
NEBP20929 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 OR4A5-201ENST00000319760 1071 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NEBP20929 PRKCE-202ENST00000394874 996 ntTSL 3 BASIC4.96□□□□□ -1.62
NEBP20929 AL357054.1-201ENST00000407035 1227 ntBASIC4.96□□□□□ -1.62
NEBP20929 RN7SKP68-201ENST00000411055 307 ntBASIC4.96□□□□□ -1.62
NEBP20929 CYP4F60P-201ENST00000439449 549 ntBASIC4.96□□□□□ -1.62
NEBP20929 TRMT112P1-201ENST00000505515 351 ntBASIC4.96□□□□□ -1.62
NEBP20929 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 AP003396.5-201ENST00000578216 632 ntTSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 AP000350.5-201ENST00000609825 613 ntBASIC4.96□□□□□ -1.62
NEBP20929 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 AC099398.1-201ENST00000567919 2776 ntBASIC4.96□□□□□ -1.62
NEBP20929 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NEBP20929 CROCCP2-202ENST00000412962 2773 ntBASIC4.96□□□□□ -1.62
NEBP20929 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 AC245140.2-201ENST00000624054 1939 ntBASIC4.96□□□□□ -1.62
NEBP20929 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 AURKC-201ENST00000302804 1247 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 MED6-203ENST00000440435 931 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 AC093789.1-201ENST00000494861 649 ntBASIC4.96□□□□□ -1.62
NEBP20929 SLA-206ENST00000517648 896 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 RAD51-AS1-203ENST00000533146 718 ntTSL 3 BASIC4.96□□□□□ -1.62
NEBP20929 KRT18P18-201ENST00000565278 1279 ntBASIC4.96□□□□□ -1.62
NEBP20929 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 AC007389.1-202ENST00000377977 1266 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 AREG-201ENST00000395748 1240 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 AL355357.1-203ENST00000402154 639 ntBASIC4.96□□□□□ -1.62
NEBP20929 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 MIR646HG-206ENST00000431181 858 ntTSL 3 BASIC4.96□□□□□ -1.62
NEBP20929 AL359555.1-201ENST00000437016 806 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 GDPD1-206ENST00000581276 1055 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 AC125257.2-201ENST00000619176 156 ntBASIC4.96□□□□□ -1.62
NEBP20929 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC4.96□□□□□ -1.62
NEBP20929 PI4KAP2-201ENST00000360806 2080 ntBASIC4.96□□□□□ -1.62
NEBP20929 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEBP20929 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC4.96□□□□□ -1.62
NEBP20929 MKRN7P-201ENST00000433469 1371 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms