Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.99□□□□□ -0.17
PCNAP12004 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
PCNAP12004 AL356585.2-201ENST00000625078 2396 ntBASIC13.98□□□□□ -0.17
PCNAP12004 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 AC244394.1-201ENST00000435000 1665 ntBASIC13.98□□□□□ -0.17
PCNAP12004 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PCNAP12004 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 TUBB8P4-201ENST00000511806 1324 ntBASIC13.98□□□□□ -0.17
PCNAP12004 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.98□□□□□ -0.17
PCNAP12004 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 MIR658-201ENST00000385210 100 ntBASIC13.98□□□□□ -0.17
PCNAP12004 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.98□□□□□ -0.17
PCNAP12004 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.98□□□□□ -0.17
PCNAP12004 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 KRT223P-202ENST00000449164 1292 ntBASIC13.98□□□□□ -0.17
PCNAP12004 AC022210.1-201ENST00000449856 793 ntBASIC13.98□□□□□ -0.17
PCNAP12004 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.98□□□□□ -0.17
PCNAP12004 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 RBM8B-201ENST00000555532 525 ntBASIC13.98□□□□□ -0.17
PCNAP12004 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.98□□□□□ -0.17
PCNAP12004 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 AC244157.2-201ENST00000616239 1006 ntBASIC13.98□□□□□ -0.17
PCNAP12004 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
PCNAP12004 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
PCNAP12004 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.98□□□□□ -0.17
PCNAP12004 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCNAP12004 AL365181.3-201ENST00000605886 3222 ntBASIC13.98□□□□□ -0.17
PCNAP12004 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
PCNAP12004 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
PCNAP12004 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PCNAP12004 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.97□□□□□ -0.17
PCNAP12004 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.97□□□□□ -0.17
PCNAP12004 LINC02486-201ENST00000604157 3000 ntBASIC13.97□□□□□ -0.17
PCNAP12004 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 AL008718.2-201ENST00000609206 1313 ntBASIC13.97□□□□□ -0.17
PCNAP12004 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.97□□□□□ -0.17
PCNAP12004 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.97□□□□□ -0.17
PCNAP12004 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.97□□□□□ -0.17
PCNAP12004 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.97□□□□□ -0.17
PCNAP12004 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.97□□□□□ -0.17
PCNAP12004 TMEM198B-204ENST00000484016 896 ntBASIC13.97□□□□□ -0.17
PCNAP12004 IGHV3-71-201ENST00000523324 359 ntBASIC13.97□□□□□ -0.17
PCNAP12004 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.97□□□□□ -0.17
PCNAP12004 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
PCNAP12004 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCNAP12004 AP005482.1-201ENST00000563722 1273 ntBASIC13.97□□□□□ -0.17
PCNAP12004 EEF1DP1-201ENST00000585891 896 ntBASIC13.97□□□□□ -0.17
PCNAP12004 AC010328.2-201ENST00000597698 1111 ntBASIC13.97□□□□□ -0.17
PCNAP12004 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.97□□□□□ -0.17
PCNAP12004 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.97□□□□□ -0.17
PCNAP12004 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCNAP12004 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.97□□□□□ -0.17
PCNAP12004 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCNAP12004 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCNAP12004 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCNAP12004 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.96□□□□□ -0.17
PCNAP12004 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PCNAP12004 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms