Protein–RNA interactions for Protein: P0CW71

HSMCR30, Putative metaphase chromosome protein 1, humanhuman

Predictions only

Length 290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSMCR30P0CW71 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 GIMAP3P-201ENST00000495150 836 ntBASIC12.97□□□□□ -0.33
HSMCR30P0CW71 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 MIR4469-201ENST00000583919 79 ntBASIC12.97□□□□□ -0.33
HSMCR30P0CW71 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 AL603764.1-201ENST00000636452 321 ntBASIC12.97□□□□□ -0.33
HSMCR30P0CW71 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 AC092117.1-201ENST00000621230 3250 ntBASIC12.97□□□□□ -0.33
HSMCR30P0CW71 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HSMCR30P0CW71 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 AL021155.1-201ENST00000438808 2637 ntBASIC12.96□□□□□ -0.33
HSMCR30P0CW71 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 AC106818.1-201ENST00000623223 3242 ntBASIC12.96□□□□□ -0.33
HSMCR30P0CW71 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.96□□□□□ -0.33
HSMCR30P0CW71 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 EIF3FP3-201ENST00000434851 1086 ntBASIC12.96□□□□□ -0.33
HSMCR30P0CW71 TPM4P1-201ENST00000436100 807 ntBASIC12.96□□□□□ -0.33
HSMCR30P0CW71 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 AP001582.1-201ENST00000525856 295 ntBASIC12.96□□□□□ -0.33
HSMCR30P0CW71 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 AP001002.3-201ENST00000623482 206 ntBASIC12.96□□□□□ -0.33
HSMCR30P0CW71 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.96□□□□□ -0.33
HSMCR30P0CW71 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 AP003969.2-201ENST00000623739 2275 ntBASIC12.96□□□□□ -0.34
HSMCR30P0CW71 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HSMCR30P0CW71 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HSMCR30P0CW71 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HSMCR30P0CW71 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HSMCR30P0CW71 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HSMCR30P0CW71 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.95□□□□□ -0.34
HSMCR30P0CW71 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.95□□□□□ -0.34
HSMCR30P0CW71 AL022323.5-201ENST00000624101 2059 ntBASIC12.95□□□□□ -0.34
HSMCR30P0CW71 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.95□□□□□ -0.34
HSMCR30P0CW71 AC026271.4-201ENST00000578214 1833 ntBASIC12.95□□□□□ -0.34
HSMCR30P0CW71 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HSMCR30P0CW71 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HSMCR30P0CW71 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms