Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.79□□□□□ -0.36
COPS3Q9UNS2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 CD8B2-202ENST00000417670 633 ntBASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 FAM197Y7-201ENST00000432892 766 ntBASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AL355864.2-201ENST00000447420 863 ntBASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 RNA5SP486-201ENST00000515961 83 ntBASIC12.79□□□□□ -0.36
COPS3Q9UNS2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AC073413.1-201ENST00000603927 732 ntBASIC12.79□□□□□ -0.36
COPS3Q9UNS2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 MARK2P9-201ENST00000430958 1727 ntBASIC12.79□□□□□ -0.36
COPS3Q9UNS2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.79□□□□□ -0.36
COPS3Q9UNS2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms