Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 CD300A-201ENST00000310828 631 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 AC103925.1-201ENST00000453155 771 ntTSL 3 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 AC087463.4-201ENST00000561964 448 ntTSL 5 BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 AP000553.2-201ENST00000609038 441 ntBASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RIMBP3Q9UFD9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 DDX6P2-201ENST00000619520 1455 ntBASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 MED15P7-201ENST00000435410 822 ntBASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RIMBP3Q9UFD9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 CREB5-205ENST00000409603 1944 ntTSL 2 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 AL157832.2-205ENST00000597245 1649 ntBASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 MIR345-201ENST00000362114 98 ntBASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 DDTP1-201ENST00000443589 383 ntBASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 AP000926.2-201ENST00000469983 358 ntBASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 MEG8_2.1-201ENST00000610604 122 ntBASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RIMBP3Q9UFD9 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 MYCNOS-202ENST00000641263 1313 ntBASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 AC245297.1-201ENST00000313342 933 ntBASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 SNORD23-201ENST00000408876 110 ntBASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 AC009237.11-201ENST00000425635 265 ntBASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 AC018892.1-201ENST00000451098 265 ntBASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 RPLP0P2-204ENST00000490750 961 ntBASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 ALOX12-AS1-209ENST00000575889 439 ntTSL 3 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 AC018755.1-201ENST00000601315 1182 ntBASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RIMBP3Q9UFD9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 RN7SKP245-201ENST00000364025 320 ntBASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 ART2P-201ENST00000415521 822 ntBASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 AGAP13P-201ENST00000417888 363 ntBASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 BNC2-207ENST00000471301 745 ntTSL 3 BASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 TMEM255B-205ENST00000488362 694 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 AP002383.2-201ENST00000545768 675 ntBASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 AC007032.1-201ENST00000609281 847 ntBASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 AC009118.3-201ENST00000622896 873 ntBASIC21.33■■□□□ 1.01
RIMBP3Q9UFD9 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms