Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VRK1Q99986 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.74□□□□□ -0.37
VRK1Q99986 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.74□□□□□ -0.37
VRK1Q99986 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.74□□□□□ -0.37
VRK1Q99986 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.74□□□□□ -0.37
VRK1Q99986 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.74□□□□□ -0.37
VRK1Q99986 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.74□□□□□ -0.37
VRK1Q99986 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 AC019294.4-201ENST00000561777 2905 ntBASIC12.74□□□□□ -0.37
VRK1Q99986 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VRK1Q99986 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.74□□□□□ -0.37
VRK1Q99986 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
VRK1Q99986 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.74□□□□□ -0.37
VRK1Q99986 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
VRK1Q99986 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VRK1Q99986 AC004945.1-201ENST00000416738 983 ntBASIC12.74□□□□□ -0.37
VRK1Q99986 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.74□□□□□ -0.37
VRK1Q99986 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.74□□□□□ -0.37
VRK1Q99986 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.74□□□□□ -0.37
VRK1Q99986 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 AC100850.1-201ENST00000506768 649 ntBASIC12.74□□□□□ -0.37
VRK1Q99986 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.74□□□□□ -0.37
VRK1Q99986 AP003171.2-201ENST00000528208 925 ntBASIC12.74□□□□□ -0.37
VRK1Q99986 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.74□□□□□ -0.37
VRK1Q99986 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.74□□□□□ -0.37
VRK1Q99986 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.74□□□□□ -0.37
VRK1Q99986 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.74□□□□□ -0.37
VRK1Q99986 AC002472.3-201ENST00000640124 621 ntBASIC12.74□□□□□ -0.37
VRK1Q99986 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VRK1Q99986 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 AC020910.5-201ENST00000623668 1865 ntBASIC12.74□□□□□ -0.37
VRK1Q99986 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.74□□□□□ -0.37
VRK1Q99986 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.74□□□□□ -0.37
VRK1Q99986 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
VRK1Q99986 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.74□□□□□ -0.37
VRK1Q99986 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VRK1Q99986 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.73□□□□□ -0.37
VRK1Q99986 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.73□□□□□ -0.37
VRK1Q99986 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.73□□□□□ -0.37
VRK1Q99986 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.73□□□□□ -0.37
VRK1Q99986 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VRK1Q99986 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.73□□□□□ -0.37
VRK1Q99986 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.73□□□□□ -0.37
VRK1Q99986 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.73□□□□□ -0.37
VRK1Q99986 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.73□□□□□ -0.37
VRK1Q99986 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.73□□□□□ -0.37
VRK1Q99986 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.73□□□□□ -0.37
VRK1Q99986 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VRK1Q99986 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VRK1Q99986 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.73□□□□□ -0.37
VRK1Q99986 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VRK1Q99986 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.73□□□□□ -0.37
VRK1Q99986 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VRK1Q99986 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms