Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 AC015909.3-201ENST00000572855 1794 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 NCLP1-201ENST00000445357 1963 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 BX679664.3-201ENST00000414070 555 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 CYP46A4P-201ENST00000414953 267 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 ISCA2P1-201ENST00000425548 448 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 AC113935.1-201ENST00000471722 555 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 AC005740.1-201ENST00000515639 522 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 RN7SL774P-201ENST00000577467 290 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 NDUFV2P1-201ENST00000596415 907 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 MEG3_2.1-201ENST00000611456 105 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 AC091544.8-201ENST00000619490 361 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 AC020907.1-201ENST00000616460 1350 ntBASIC12.51□□□□□ -0.41
TMEM54Q969K7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
TMEM54Q969K7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM54Q969K7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 KRT17P5-201ENST00000332088 839 ntBASIC12.5□□□□□ -0.41
TMEM54Q969K7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 ACTG1P2-201ENST00000415776 1125 ntBASIC12.5□□□□□ -0.41
TMEM54Q969K7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 ACTG1P11-201ENST00000425411 1125 ntBASIC12.5□□□□□ -0.41
TMEM54Q969K7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 HIST2H2BC-201ENST00000498492 580 ntBASIC12.5□□□□□ -0.41
TMEM54Q969K7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 MIR6799-201ENST00000620297 69 ntBASIC12.5□□□□□ -0.41
TMEM54Q969K7 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms