Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 OS9-203ENST00000389142 2457 ntTSL 5 BASIC9.53□□□□□ -0.88
LINC00308Q8TCZ7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
LINC00308Q8TCZ7 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 AC134407.3-201ENST00000624035 2139 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 ARSEP1-201ENST00000420443 635 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 DDX12P-201ENST00000432996 2947 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 FAAHP1-202ENST00000446499 1238 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 RPL13AP23-201ENST00000480739 586 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 GIMAP3P-201ENST00000495150 836 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 AC104692.2-201ENST00000603054 253 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 AC093813.1-201ENST00000605066 256 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 AL596442.2-201ENST00000610240 980 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 PAM-203ENST00000346918 3302 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 SUPT20HL1-201ENST00000436466 2618 ntBASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
LINC00308Q8TCZ7 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC00308Q8TCZ7 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
LINC00308Q8TCZ7 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC9.51□□□□□ -0.89
LINC00308Q8TCZ7 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
LINC00308Q8TCZ7 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
LINC00308Q8TCZ7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LINC00308Q8TCZ7 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
LINC00308Q8TCZ7 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LINC00308Q8TCZ7 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms