Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 RN7SL162P-201ENST00000579233 292 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 Z82244.2-201ENST00000632196 448 ntBASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS13DQ5THJ4 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 POP5-201ENST00000341039 913 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AC020763.4-201ENST00000623414 4170 ntBASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AC016397.2-201ENST00000624848 1985 ntBASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 HAX1-211ENST00000532105 771 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AC022001.3-201ENST00000606330 596 ntBASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 MARCKSL1P2-201ENST00000401037 976 ntBASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 AC026884.1-201ENST00000418296 457 ntBASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 RPSAP16-201ENST00000447583 821 ntBASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 SLC9A7P1-201ENST00000554295 3311 ntBASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
VPS13DQ5THJ4 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 OR4C14P-201ENST00000440929 923 ntBASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 URB1-AS1-201ENST00000534991 831 ntBASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 HNRNPA1P11-201ENST00000580106 956 ntBASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 AC034205.3-201ENST00000603595 1376 ntBASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 AL591499.1-201ENST00000307155 1153 ntBASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
VPS13DQ5THJ4 RN7SL202P-201ENST00000584410 262 ntBASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms