Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 THAP4-203ENST00000402545 833 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 TUBB2BP1-201ENST00000404155 871 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 RPL18AP16-201ENST00000424057 531 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 RPSAP12-201ENST00000435879 888 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AL136084.1-201ENST00000449172 318 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ABCC6P2-201ENST00000526069 590 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 GRAMD4P6-201ENST00000556999 244 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AC022001.3-201ENST00000606330 596 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AC009041.4-201ENST00000620075 638 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 AL109954.1-202ENST00000564051 2148 ntBASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.67□□□□□ -0.22
RSPO4Q2I0M5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 KRT8P18-201ENST00000413425 1445 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 BX679664.3-201ENST00000414070 555 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 RNU1-80P-201ENST00000459500 161 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 AC113935.1-201ENST00000471722 555 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 RNF7-205ENST00000480908 782 ntTSL 4 BASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 TBC1D3P6-201ENST00000505954 962 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 AC005740.1-201ENST00000515639 522 ntBASIC13.66□□□□□ -0.22
RSPO4Q2I0M5 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms