Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
IRX4P78413 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
IRX4P78413 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
IRX4P78413 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.98□□□□□ -0.01
IRX4P78413 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.98□□□□□ -0.01
IRX4P78413 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.98□□□□□ -0.01
IRX4P78413 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC14.98□□□□□ -0.01
IRX4P78413 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.98□□□□□ -0.01
IRX4P78413 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.98□□□□□ -0.01
IRX4P78413 AC104073.2-201ENST00000453737 312 ntBASIC14.98□□□□□ -0.01
IRX4P78413 AC106794.1-201ENST00000506935 792 ntBASIC14.98□□□□□ -0.01
IRX4P78413 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 AC013355.1-201ENST00000562625 723 ntBASIC14.98□□□□□ -0.01
IRX4P78413 RN7SL163P-201ENST00000583100 276 ntBASIC14.98□□□□□ -0.01
IRX4P78413 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.98□□□□□ -0.01
IRX4P78413 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IRX4P78413 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
IRX4P78413 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.97□□□□□ -0.01
IRX4P78413 AC011474.4-201ENST00000623523 2076 ntBASIC14.97□□□□□ -0.01
IRX4P78413 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
IRX4P78413 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.97□□□□□ -0.01
IRX4P78413 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.97□□□□□ -0.01
IRX4P78413 HLA-K-203ENST00000430151 1046 ntBASIC14.97□□□□□ -0.01
IRX4P78413 AC234782.1-201ENST00000451950 919 ntBASIC14.97□□□□□ -0.01
IRX4P78413 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.97□□□□□ -0.01
IRX4P78413 AC106820.3-201ENST00000561653 397 ntBASIC14.97□□□□□ -0.01
IRX4P78413 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.97□□□□□ -0.01
IRX4P78413 RN7SL555P-201ENST00000584742 339 ntBASIC14.97□□□□□ -0.01
IRX4P78413 BNIP3P13-201ENST00000599968 566 ntBASIC14.97□□□□□ -0.01
IRX4P78413 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.97□□□□□ -0.01
IRX4P78413 AL805961.1-203ENST00000641078 1258 ntBASIC14.97□□□□□ -0.01
IRX4P78413 AC004923.1-202ENST00000642106 209 ntBASIC14.97□□□□□ -0.01
IRX4P78413 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
IRX4P78413 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.97□□□□□ -0.01
IRX4P78413 TCAF1P1-201ENST00000414990 2232 ntBASIC14.97□□□□□ -0.01
IRX4P78413 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
IRX4P78413 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
IRX4P78413 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IRX4P78413 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms