Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.07□□□□□ -0.32
CENPAP49450 AP001889.1-201ENST00000525414 633 ntBASIC13.07□□□□□ -0.32
CENPAP49450 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.07□□□□□ -0.32
CENPAP49450 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.07□□□□□ -0.32
CENPAP49450 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.07□□□□□ -0.32
CENPAP49450 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.07□□□□□ -0.32
CENPAP49450 AC008825.2-201ENST00000603374 718 ntBASIC13.07□□□□□ -0.32
CENPAP49450 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.07□□□□□ -0.32
CENPAP49450 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 AC009093.2-202ENST00000620513 2079 ntBASIC13.07□□□□□ -0.32
CENPAP49450 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.07□□□□□ -0.32
CENPAP49450 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CENPAP49450 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CENPAP49450 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 AL354989.2-201ENST00000435838 1540 ntBASIC13.07□□□□□ -0.32
CENPAP49450 TUBB8P4-201ENST00000511806 1324 ntBASIC13.07□□□□□ -0.32
CENPAP49450 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 LINC02486-201ENST00000604157 3000 ntBASIC13.07□□□□□ -0.32
CENPAP49450 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CENPAP49450 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CENPAP49450 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.06□□□□□ -0.32
CENPAP49450 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.06□□□□□ -0.32
CENPAP49450 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.06□□□□□ -0.32
CENPAP49450 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.06□□□□□ -0.32
CENPAP49450 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CENPAP49450 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CENPAP49450 AC092123.2-201ENST00000611189 5421 ntBASIC13.06□□□□□ -0.32
CENPAP49450 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.06□□□□□ -0.32
CENPAP49450 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.06□□□□□ -0.32
CENPAP49450 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.06□□□□□ -0.32
CENPAP49450 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.06□□□□□ -0.32
CENPAP49450 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.06□□□□□ -0.32
CENPAP49450 RN7SL837P-201ENST00000463010 287 ntBASIC13.06□□□□□ -0.32
CENPAP49450 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 SLC25A47P1-201ENST00000531577 414 ntBASIC13.06□□□□□ -0.32
CENPAP49450 AC027237.1-201ENST00000560942 655 ntBASIC13.06□□□□□ -0.32
CENPAP49450 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.06□□□□□ -0.32
CENPAP49450 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CENPAP49450 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.06□□□□□ -0.32
CENPAP49450 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 AC064801.2-201ENST00000625052 1303 ntBASIC13.06□□□□□ -0.32
CENPAP49450 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.06□□□□□ -0.32
CENPAP49450 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.06□□□□□ -0.32
CENPAP49450 AC027612.1-201ENST00000445234 2395 ntBASIC13.06□□□□□ -0.32
CENPAP49450 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CENPAP49450 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
CENPAP49450 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms