Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC15.34■□□□□ 0.05
HTTP42858 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 AC114812.4-201ENST00000506676 757 ntBASIC15.34■□□□□ 0.05
HTTP42858 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC15.34■□□□□ 0.05
HTTP42858 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HTTP42858 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC15.34■□□□□ 0.05
HTTP42858 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.34■□□□□ 0.05
HTTP42858 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.34■□□□□ 0.05
HTTP42858 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 MIR766-201ENST00000390223 111 ntBASIC15.34■□□□□ 0.05
HTTP42858 MIR1307-201ENST00000408840 149 ntBASIC15.34■□□□□ 0.05
HTTP42858 ATP5G1P7-201ENST00000444398 400 ntBASIC15.34■□□□□ 0.05
HTTP42858 CHCHD2P6-201ENST00000454346 447 ntBASIC15.34■□□□□ 0.05
HTTP42858 RN7SL487P-201ENST00000468140 344 ntBASIC15.34■□□□□ 0.05
HTTP42858 RN7SL789P-201ENST00000478944 293 ntBASIC15.34■□□□□ 0.05
HTTP42858 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 MIR6871-201ENST00000613433 56 ntBASIC15.34■□□□□ 0.05
HTTP42858 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.34■□□□□ 0.05
HTTP42858 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.34■□□□□ 0.05
HTTP42858 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.34■□□□□ 0.05
HTTP42858 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 DNM1P48-201ENST00000419538 439 ntBASIC15.34■□□□□ 0.05
HTTP42858 AC133555.4-201ENST00000569081 152 ntBASIC15.34■□□□□ 0.05
HTTP42858 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HTTP42858 AC136475.9-201ENST00000605240 497 ntBASIC15.34■□□□□ 0.05
HTTP42858 MIR7704-201ENST00000610524 59 ntBASIC15.34■□□□□ 0.05
HTTP42858 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.34■□□□□ 0.05
HTTP42858 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTTP42858 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
HTTP42858 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
HTTP42858 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTTP42858 AC139749.1-202ENST00000617529 3139 ntBASIC15.33■□□□□ 0.05
HTTP42858 RNF7-202ENST00000393000 805 ntTSL 2 BASIC15.33■□□□□ 0.05
HTTP42858 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC15.33■□□□□ 0.05
HTTP42858 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTTP42858 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTTP42858 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTTP42858 AC137723.2-201ENST00000623540 398 ntBASIC15.33■□□□□ 0.05
HTTP42858 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTTP42858 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTTP42858 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.33■□□□□ 0.04
HTTP42858 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTTP42858 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTTP42858 AL391903.1-201ENST00000407513 365 ntBASIC15.33■□□□□ 0.04
HTTP42858 HNRNPA1P68-201ENST00000425806 979 ntBASIC15.33■□□□□ 0.04
HTTP42858 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC15.33■□□□□ 0.04
HTTP42858 PLAC9P1-203ENST00000440031 223 ntBASIC15.33■□□□□ 0.04
HTTP42858 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC15.33■□□□□ 0.04
HTTP42858 ALOX12P1-201ENST00000579299 1229 ntBASIC15.33■□□□□ 0.04
HTTP42858 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTTP42858 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTTP42858 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
HTTP42858 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTTP42858 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTTP42858 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTTP42858 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.33■□□□□ 0.04
HTTP42858 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.33■□□□□ 0.04
HTTP42858 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTTP42858 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HTTP42858 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC15.32■□□□□ 0.04
HTTP42858 AC105443.1-201ENST00000433754 712 ntBASIC15.32■□□□□ 0.04
HTTP42858 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC15.32■□□□□ 0.04
HTTP42858 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTTP42858 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.32■□□□□ 0.04
HTTP42858 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC15.32■□□□□ 0.04
HTTP42858 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms