Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 AC152010.1-201ENST00000415779 2006 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.72□□□□□ -0.53
CEACAM3P40198 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CEACAM3P40198 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 AC041040.2-201ENST00000622926 2899 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 FAM90A7P-201ENST00000382628 1395 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 FAM90A23P-201ENST00000400136 1395 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC11.72□□□□□ -0.53
CEACAM3P40198 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CEACAM3P40198 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 XBP1P1-201ENST00000436573 652 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 VDAC1P1-201ENST00000439229 848 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 MARK2P5-201ENST00000507649 634 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC11.72□□□□□ -0.53
CEACAM3P40198 AC003686.1-201ENST00000550956 1034 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11.72□□□□□ -0.53
CEACAM3P40198 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.72□□□□□ -0.53
CEACAM3P40198 NAP1L6-202ENST00000641404 1222 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.72□□□□□ -0.53
CEACAM3P40198 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CEACAM3P40198 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.72□□□□□ -0.53
CEACAM3P40198 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.72□□□□□ -0.53
CEACAM3P40198 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
CEACAM3P40198 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.72□□□□□ -0.53
CEACAM3P40198 AC018629.1-201ENST00000623381 1736 ntBASIC11.72□□□□□ -0.53
CEACAM3P40198 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CEACAM3P40198 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.72□□□□□ -0.53
CEACAM3P40198 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC11.71□□□□□ -0.53
CEACAM3P40198 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 CYP4F23P-201ENST00000593402 1579 ntBASIC11.71□□□□□ -0.53
CEACAM3P40198 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.71□□□□□ -0.53
CEACAM3P40198 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC11.71□□□□□ -0.53
CEACAM3P40198 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.71□□□□□ -0.53
CEACAM3P40198 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC11.71□□□□□ -0.53
CEACAM3P40198 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CEACAM3P40198 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CEACAM3P40198 AC136759.1-202ENST00000530858 2194 ntBASIC11.71□□□□□ -0.53
CEACAM3P40198 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.71□□□□□ -0.53
CEACAM3P40198 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC11.71□□□□□ -0.53
CEACAM3P40198 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 AC007274.1-201ENST00000439805 662 ntBASIC11.71□□□□□ -0.53
CEACAM3P40198 AC104073.2-201ENST00000453737 312 ntBASIC11.71□□□□□ -0.53
CEACAM3P40198 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 KRT8P13-201ENST00000463294 1010 ntBASIC11.71□□□□□ -0.53
CEACAM3P40198 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC11.71□□□□□ -0.53
CEACAM3P40198 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CEACAM3P40198 AC009779.1-201ENST00000551138 283 ntBASIC11.71□□□□□ -0.53
CEACAM3P40198 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms