Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.76■□□□□ 0.43
COL15A1P39059 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.76■□□□□ 0.43
COL15A1P39059 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.76■□□□□ 0.43
COL15A1P39059 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 AC106827.1-201ENST00000366454 431 ntBASIC17.76■□□□□ 0.43
COL15A1P39059 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.76■□□□□ 0.43
COL15A1P39059 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.76■□□□□ 0.43
COL15A1P39059 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.76■□□□□ 0.43
COL15A1P39059 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.76■□□□□ 0.43
COL15A1P39059 COQ10BP2-201ENST00000513804 724 ntBASIC17.76■□□□□ 0.43
COL15A1P39059 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
COL15A1P39059 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.76■□□□□ 0.43
COL15A1P39059 AC005777.1-201ENST00000588332 187 ntBASIC17.76■□□□□ 0.43
COL15A1P39059 TYMSP2-201ENST00000589501 424 ntBASIC17.76■□□□□ 0.43
COL15A1P39059 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.76■□□□□ 0.43
COL15A1P39059 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.76■□□□□ 0.43
COL15A1P39059 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.76■□□□□ 0.43
COL15A1P39059 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 AC026336.4-201ENST00000624565 1050 ntBASIC17.76■□□□□ 0.43
COL15A1P39059 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
COL15A1P39059 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL15A1P39059 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COL15A1P39059 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.75■□□□□ 0.43
COL15A1P39059 AL139158.3-201ENST00000641212 1562 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.75■□□□□ 0.43
COL15A1P39059 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.75■□□□□ 0.43
COL15A1P39059 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 HSPA7-201ENST00000445535 1927 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
COL15A1P39059 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.75■□□□□ 0.43
COL15A1P39059 AC068760.1-201ENST00000493579 1953 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.75■□□□□ 0.43
COL15A1P39059 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
COL15A1P39059 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL15A1P39059 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL15A1P39059 AF274858.1-201ENST00000406288 372 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.75■□□□□ 0.43
COL15A1P39059 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.75■□□□□ 0.43
COL15A1P39059 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.75■□□□□ 0.43
COL15A1P39059 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.75■□□□□ 0.43
COL15A1P39059 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL15A1P39059 RN7SL128P-201ENST00000467883 305 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 KNOP1P1-201ENST00000542108 989 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COL15A1P39059 AC073869.4-201ENST00000620841 800 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 AC126755.5-201ENST00000622756 267 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 AC005274.1-201ENST00000623460 802 ntBASIC17.75■□□□□ 0.43
COL15A1P39059 MME-218ENST00000625667 363 ntTSL 5 BASIC17.75■□□□□ 0.43
COL15A1P39059 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.75■□□□□ 0.43
COL15A1P39059 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COL15A1P39059 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.75■□□□□ 0.43
COL15A1P39059 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
COL15A1P39059 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COL15A1P39059 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
COL15A1P39059 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 AL357373.1-201ENST00000394974 322 ntBASIC17.74■□□□□ 0.43
COL15A1P39059 ACTBP14-201ENST00000411655 1089 ntBASIC17.74■□□□□ 0.43
COL15A1P39059 HMGA1P1-201ENST00000415560 1062 ntBASIC17.74■□□□□ 0.43
COL15A1P39059 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC17.74■□□□□ 0.43
COL15A1P39059 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.74■□□□□ 0.43
COL15A1P39059 RN7SL351P-201ENST00000469306 248 ntBASIC17.74■□□□□ 0.43
COL15A1P39059 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.74■□□□□ 0.43
COL15A1P39059 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.74■□□□□ 0.43
COL15A1P39059 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 BAP1-211ENST00000615113 489 ntBASIC17.74■□□□□ 0.43
COL15A1P39059 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.74■□□□□ 0.43
COL15A1P39059 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COL15A1P39059 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COL15A1P39059 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.74■□□□□ 0.43
COL15A1P39059 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms