Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 CRIP1P2-201ENST00000425396 228 ntBASIC14.33□□□□□ -0.12
LTBRP36941 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LTBRP36941 AC093106.1-201ENST00000437271 352 ntBASIC14.33□□□□□ -0.12
LTBRP36941 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC14.33□□□□□ -0.12
LTBRP36941 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC14.33□□□□□ -0.12
LTBRP36941 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
LTBRP36941 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC14.33□□□□□ -0.12
LTBRP36941 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC14.33□□□□□ -0.12
LTBRP36941 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC14.33□□□□□ -0.12
LTBRP36941 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC14.33□□□□□ -0.12
LTBRP36941 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 AC112220.4-201ENST00000604982 1263 ntBASIC14.33□□□□□ -0.12
LTBRP36941 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC14.33□□□□□ -0.12
LTBRP36941 AC137723.2-201ENST00000623540 398 ntBASIC14.33□□□□□ -0.12
LTBRP36941 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC14.33□□□□□ -0.12
LTBRP36941 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
LTBRP36941 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBRP36941 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBRP36941 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
LTBRP36941 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBRP36941 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 AC006486.2-201ENST00000624246 2199 ntBASIC14.33□□□□□ -0.12
LTBRP36941 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBRP36941 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
LTBRP36941 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBRP36941 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LTBRP36941 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
LTBRP36941 KRT8P25-201ENST00000473150 1456 ntBASIC14.32□□□□□ -0.12
LTBRP36941 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.32□□□□□ -0.12
LTBRP36941 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.32□□□□□ -0.12
LTBRP36941 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.32□□□□□ -0.12
LTBRP36941 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LTBRP36941 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LTBRP36941 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBRP36941 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LTBRP36941 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBRP36941 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBRP36941 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBRP36941 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
LTBRP36941 ABCD1P3-201ENST00000562927 605 ntBASIC14.32□□□□□ -0.12
LTBRP36941 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC14.32□□□□□ -0.12
LTBRP36941 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBRP36941 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBRP36941 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBRP36941 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBRP36941 EMP3-204ENST00000596315 761 ntTSL 2 BASIC14.32□□□□□ -0.12
LTBRP36941 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC14.32□□□□□ -0.12
LTBRP36941 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBRP36941 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC14.32□□□□□ -0.12
LTBRP36941 Z82244.2-201ENST00000632196 448 ntBASIC14.32□□□□□ -0.12
LTBRP36941 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBRP36941 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBRP36941 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 MTHFR-210ENST00000641407 2387 ntBASIC14.32□□□□□ -0.12
LTBRP36941 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBRP36941 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBRP36941 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LTBRP36941 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LTBRP36941 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms