Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DPA1P20036 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 AC092053.3-201ENST00000641308 4975 ntBASIC14.41□□□□□ -0.1
HLA-DPA1P20036 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 AC006033.1-201ENST00000440505 426 ntBASIC14.41□□□□□ -0.1
HLA-DPA1P20036 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 MIR4525-201ENST00000580000 75 ntBASIC14.41□□□□□ -0.1
HLA-DPA1P20036 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 MIR3188-201ENST00000583494 85 ntBASIC14.41□□□□□ -0.1
HLA-DPA1P20036 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 AC243960.2-201ENST00000600996 747 ntBASIC14.41□□□□□ -0.1
HLA-DPA1P20036 MIR6869-201ENST00000619434 62 ntBASIC14.41□□□□□ -0.1
HLA-DPA1P20036 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPA1P20036 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AK2P2-201ENST00000439142 405 ntBASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AC091804.1-201ENST00000486888 567 ntBASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPA1P20036 KRT18P8-201ENST00000581937 1246 ntBASIC14.4□□□□□ -0.1
HLA-DPA1P20036 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms