Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.14■□□□□ 0.33
NCLP19338 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NCLP19338 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NCLP19338 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.14■□□□□ 0.33
NCLP19338 KLF2P2-201ENST00000416807 1039 ntBASIC17.14■□□□□ 0.33
NCLP19338 AC007389.4-201ENST00000454674 793 ntBASIC17.14■□□□□ 0.33
NCLP19338 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.14■□□□□ 0.33
NCLP19338 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.14■□□□□ 0.33
NCLP19338 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.14■□□□□ 0.33
NCLP19338 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.14■□□□□ 0.33
NCLP19338 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.14■□□□□ 0.33
NCLP19338 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.14■□□□□ 0.33
NCLP19338 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.14■□□□□ 0.33
NCLP19338 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 AC072061.1-201ENST00000569710 2234 ntBASIC17.14■□□□□ 0.33
NCLP19338 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.14■□□□□ 0.33
NCLP19338 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.14■□□□□ 0.33
NCLP19338 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NCLP19338 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NCLP19338 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NCLP19338 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
NCLP19338 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NCLP19338 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC17.14■□□□□ 0.33
NCLP19338 PCDHB18P-202ENST00000526308 3197 ntBASIC17.14■□□□□ 0.33
NCLP19338 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 AC090643.2-201ENST00000623442 2029 ntBASIC17.13■□□□□ 0.33
NCLP19338 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NCLP19338 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.13■□□□□ 0.33
NCLP19338 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC17.13■□□□□ 0.33
NCLP19338 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 AC004945.1-201ENST00000416738 983 ntBASIC17.13■□□□□ 0.33
NCLP19338 EIF3FP3-201ENST00000434851 1086 ntBASIC17.13■□□□□ 0.33
NCLP19338 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
NCLP19338 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.13■□□□□ 0.33
NCLP19338 HILS1-202ENST00000545329 423 ntBASIC17.13■□□□□ 0.33
NCLP19338 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.13■□□□□ 0.33
NCLP19338 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.13■□□□□ 0.33
NCLP19338 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC17.13■□□□□ 0.33
NCLP19338 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.13■□□□□ 0.33
NCLP19338 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC17.13■□□□□ 0.33
NCLP19338 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NCLP19338 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.13■□□□□ 0.33
NCLP19338 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NCLP19338 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCLP19338 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NCLP19338 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.12■□□□□ 0.33
NCLP19338 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCLP19338 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.12■□□□□ 0.33
NCLP19338 AC112492.5-201ENST00000421897 457 ntBASIC17.12■□□□□ 0.33
NCLP19338 TMEM14DP-201ENST00000422205 345 ntBASIC17.12■□□□□ 0.33
NCLP19338 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.12■□□□□ 0.33
NCLP19338 AC114812.1-204ENST00000449669 728 ntBASIC17.12■□□□□ 0.33
NCLP19338 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.12■□□□□ 0.33
NCLP19338 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.12■□□□□ 0.33
NCLP19338 IGHV3-71-201ENST00000523324 359 ntBASIC17.12■□□□□ 0.33
NCLP19338 AC133539.2-201ENST00000604757 467 ntBASIC17.12■□□□□ 0.33
NCLP19338 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCLP19338 MRPL37P1-201ENST00000592451 1337 ntBASIC17.12■□□□□ 0.33
NCLP19338 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC17.12■□□□□ 0.33
NCLP19338 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCLP19338 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCLP19338 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms