Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.77□□□□□ -0.05
CD48P09326 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.77□□□□□ -0.05
CD48P09326 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 MIR1908-201ENST00000410394 80 ntBASIC14.77□□□□□ -0.05
CD48P09326 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.77□□□□□ -0.05
CD48P09326 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.77□□□□□ -0.05
CD48P09326 RPS2P32-201ENST00000439199 892 ntBASIC14.77□□□□□ -0.05
CD48P09326 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.77□□□□□ -0.05
CD48P09326 SERPINA13P-202ENST00000478994 924 ntBASIC14.77□□□□□ -0.05
CD48P09326 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.77□□□□□ -0.05
CD48P09326 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.77□□□□□ -0.05
CD48P09326 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.77□□□□□ -0.05
CD48P09326 AC044849.1-201ENST00000519737 1188 ntBASIC14.77□□□□□ -0.05
CD48P09326 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.77□□□□□ -0.05
CD48P09326 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.77□□□□□ -0.05
CD48P09326 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.77□□□□□ -0.05
CD48P09326 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.77□□□□□ -0.05
CD48P09326 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.77□□□□□ -0.05
CD48P09326 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CD48P09326 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.77□□□□□ -0.05
CD48P09326 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
CD48P09326 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.77□□□□□ -0.05
CD48P09326 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.77□□□□□ -0.05
CD48P09326 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.77□□□□□ -0.05
CD48P09326 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD48P09326 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.76□□□□□ -0.05
CD48P09326 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.76□□□□□ -0.05
CD48P09326 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 NKAIN1P1-201ENST00000435754 582 ntBASIC14.76□□□□□ -0.05
CD48P09326 AK2P2-201ENST00000439142 405 ntBASIC14.76□□□□□ -0.05
CD48P09326 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.76□□□□□ -0.05
CD48P09326 AC104306.2-201ENST00000451877 341 ntBASIC14.76□□□□□ -0.05
CD48P09326 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.76□□□□□ -0.05
CD48P09326 RN7SL277P-201ENST00000481521 288 ntBASIC14.76□□□□□ -0.05
CD48P09326 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.76□□□□□ -0.05
CD48P09326 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.76□□□□□ -0.05
CD48P09326 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD48P09326 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.76□□□□□ -0.05
CD48P09326 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CD48P09326 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms