Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 BRD7P5-201ENST00000299197 1822 ntBASIC17.05■□□□□ 0.32
POLR3DP05423 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
POLR3DP05423 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
POLR3DP05423 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 CICP4-201ENST00000447359 2812 ntBASIC17.05■□□□□ 0.32
POLR3DP05423 CICP16-201ENST00000502609 2813 ntBASIC17.05■□□□□ 0.32
POLR3DP05423 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 AP000356.3-201ENST00000382243 753 ntBASIC17.05■□□□□ 0.32
POLR3DP05423 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 AC069218.1-201ENST00000435269 762 ntBASIC17.05■□□□□ 0.32
POLR3DP05423 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 NOC2LP1-201ENST00000450578 752 ntBASIC17.05■□□□□ 0.32
POLR3DP05423 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.05■□□□□ 0.32
POLR3DP05423 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.05■□□□□ 0.32
POLR3DP05423 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.05■□□□□ 0.32
POLR3DP05423 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.05■□□□□ 0.32
POLR3DP05423 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.05■□□□□ 0.32
POLR3DP05423 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.05■□□□□ 0.32
POLR3DP05423 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
POLR3DP05423 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.05■□□□□ 0.32
POLR3DP05423 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
POLR3DP05423 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.05■□□□□ 0.32
POLR3DP05423 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR3DP05423 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 MARK2P16-201ENST00000605714 1723 ntBASIC17.04■□□□□ 0.32
POLR3DP05423 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.04■□□□□ 0.32
POLR3DP05423 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
POLR3DP05423 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 CCT8L1P-201ENST00000465400 1674 ntBASIC17.04■□□□□ 0.32
POLR3DP05423 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR3DP05423 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR3DP05423 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR3DP05423 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 AC073869.2-201ENST00000417338 1026 ntBASIC17.04■□□□□ 0.32
POLR3DP05423 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR3DP05423 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR3DP05423 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR3DP05423 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.04■□□□□ 0.32
POLR3DP05423 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.04■□□□□ 0.32
POLR3DP05423 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR3DP05423 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR3DP05423 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.04■□□□□ 0.32
POLR3DP05423 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR3DP05423 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR3DP05423 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms