Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AC090505.1-201ENST00000430515 1834 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AC026748.1-201ENST00000624349 3251 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AL583805.1-201ENST00000391389 531 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AC026316.1-201ENST00000398900 414 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AL592076.1-201ENST00000424448 303 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 OR2R1P-201ENST00000441404 914 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 NOC2LP1-201ENST00000450578 752 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AC003686.1-201ENST00000550956 1034 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 AC005586.2-201ENST00000563946 837 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 U62317.3-201ENST00000608319 855 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 KRT18P9-201ENST00000604826 1300 ntBASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NPIPA3F8WFD2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 AC124068.2-201ENST00000569473 1109 ntBASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 MIR3147-201ENST00000577811 66 ntBASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 MIR5572-201ENST00000583188 137 ntBASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 AC103810.10-201ENST00000606504 343 ntBASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 MIR7845-201ENST00000618396 99 ntBASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NPIPA3F8WFD2 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms