Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.14■□□□□ 0.18
TMEM88BA6NKF7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AC106872.9-201ENST00000512437 1393 ntBASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 RPS6-201ENST00000315377 863 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 ATP6V1B1-AS1-201ENST00000422761 1129 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 KRT18P42-201ENST00000505048 1255 ntBASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 MIR4459-201ENST00000581837 66 ntBASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AC009812.1-201ENST00000605948 1059 ntBASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AC137723.2-201ENST00000623540 398 ntBASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AC124944.3-201ENST00000607976 1304 ntBASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM88BA6NKF7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 RBP4-203ENST00000371469 814 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 RPSAP61-201ENST00000412542 878 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 DNM1P48-201ENST00000419538 439 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 RPSAP16-201ENST00000447583 821 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 SNORA47-201ENST00000458862 138 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 AC017007.3-201ENST00000479865 435 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 AC120057.1-201ENST00000483947 663 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 PDPN-208ENST00000509009 571 ntTSL 4 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 AC127002.1-201ENST00000619123 455 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 MIR6819-201ENST00000622122 61 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 AC015813.5-201ENST00000624641 1514 ntBASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM88BA6NKF7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 AC008894.3-201ENST00000624324 3103 ntBASIC16.12■□□□□ 0.17
TMEM88BA6NKF7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms