Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 MIR661-201ENST00000384842 89 ntBASIC12.46□□□□□ -0.41
CCDC107Q8WV48 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 AC236430.1-201ENST00000402231 743 ntBASIC12.46□□□□□ -0.41
CCDC107Q8WV48 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 API5-211ENST00000534695 560 ntTSL 5 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 ENPP7P5-201ENST00000541031 1031 ntBASIC12.46□□□□□ -0.41
CCDC107Q8WV48 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 CLUHP6-201ENST00000580789 941 ntBASIC12.46□□□□□ -0.41
CCDC107Q8WV48 RN7SL204P-201ENST00000582831 262 ntBASIC12.46□□□□□ -0.41
CCDC107Q8WV48 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 WFDC1-204ENST00000613603 549 ntBASIC12.46□□□□□ -0.41
CCDC107Q8WV48 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCDC107Q8WV48 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCDC107Q8WV48 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AL157996.1-201ENST00000624684 2299 ntBASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 POM121L14P-201ENST00000406100 1558 ntBASIC12.45□□□□□ -0.42
CCDC107Q8WV48 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.45□□□□□ -0.42
CCDC107Q8WV48 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AC093433.1-201ENST00000458048 571 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms