Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 HNRNPA1P10-201ENST00000444945 962 ntBASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 NALT1-202ENST00000450304 437 ntTSL 3 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 RN7SL838P-201ENST00000481676 295 ntBASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 MT3-202ENST00000561640 514 ntTSL 3 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 PCDHA1-201ENST00000378133 2726 ntBASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 LAP3P2-201ENST00000454686 1454 ntBASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 C18orf15-201ENST00000623680 2534 ntBASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 OR7E12P-201ENST00000344740 973 ntBASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 THAP4-203ENST00000402545 833 ntTSL 5 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 RN7SL340P-201ENST00000470792 296 ntBASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 MYL6-215ENST00000549566 685 ntTSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 AL359219.1-201ENST00000556311 934 ntBASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 KRT8P18-201ENST00000413425 1445 ntBASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CCDC168Q8NDH2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AC112693.3-201ENST00000624819 1983 ntBASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 NORAD-201ENST00000565493 5339 ntBASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 WDR54-202ENST00000409791 854 ntTSL 3 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AC079325.1-201ENST00000430386 857 ntBASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 CA5BP1-205ENST00000435806 1064 ntBASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 MARK2P17-201ENST00000498560 841 ntBASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 HPX-213ENST00000615166 826 ntTSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CCDC168Q8NDH2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms