Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 AL606495.2-201ENST00000605867 535 ntBASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 AL591471.1-201ENST00000621855 229 ntBASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 AC215219.1-201ENST00000400706 1817 ntBASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 TPT1P11-201ENST00000458482 498 ntBASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 MIR3188-201ENST00000583494 85 ntBASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 AC020922.3-201ENST00000595064 547 ntBASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 AC106872.11-201ENST00000605838 421 ntBASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 AC097724.1-201ENST00000609581 426 ntBASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM48Q8IWZ4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 ST13P19-201ENST00000442505 1124 ntBASIC14.09□□□□□ -0.15
TRIM48Q8IWZ4 RN7SL769P-201ENST00000469386 295 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms