Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 RN7SL128P-201ENST00000467883 305 ntBASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AC023968.2-201ENST00000560593 1049 ntBASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 CASP16P-204ENST00000635032 809 ntBASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LYSMD4Q5XG99 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
LYSMD4Q5XG99 AC073347.1-201ENST00000421633 2643 ntBASIC13.83□□□□□ -0.19
LYSMD4Q5XG99 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LYSMD4Q5XG99 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AC022080.1-201ENST00000366255 781 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 HMGA1P1-201ENST00000415560 1062 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AL080243.1-201ENST00000423293 1060 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AC104961.1-201ENST00000427605 771 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 RNLS-203ENST00000437752 525 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 KRT18P15-201ENST00000458108 1291 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AL049840.2-201ENST00000602722 535 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AC005274.1-201ENST00000623460 802 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AC022532.1-201ENST00000624563 1728 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AC011498.7-201ENST00000624986 2027 ntBASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.83□□□□□ -0.2
LYSMD4Q5XG99 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD4Q5XG99 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms