Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 MRPS18AP1-201ENST00000414458 589 ntBASIC11.44□□□□□ -0.58
FAM78BQ5VT40 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 AC114812.1-204ENST00000449669 728 ntBASIC11.44□□□□□ -0.58
FAM78BQ5VT40 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 GIMAP3P-201ENST00000495150 836 ntBASIC11.44□□□□□ -0.58
FAM78BQ5VT40 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 AC007431.3-201ENST00000623221 587 ntBASIC11.44□□□□□ -0.58
FAM78BQ5VT40 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 MAPK10-262ENST00000641051 5738 ntBASIC11.44□□□□□ -0.58
FAM78BQ5VT40 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 LRRC59-203ENST00000576448 1531 ntBASIC11.44□□□□□ -0.58
FAM78BQ5VT40 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 KHSRPP1-201ENST00000427983 1768 ntBASIC11.44□□□□□ -0.58
FAM78BQ5VT40 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
FAM78BQ5VT40 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 NCLP1-201ENST00000445357 1963 ntBASIC11.43□□□□□ -0.58
FAM78BQ5VT40 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 AC139712.1-201ENST00000378256 1875 ntBASIC11.43□□□□□ -0.58
FAM78BQ5VT40 LINC02486-201ENST00000604157 3000 ntBASIC11.43□□□□□ -0.58
FAM78BQ5VT40 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 RNU1-114P-201ENST00000365297 166 ntBASIC11.43□□□□□ -0.58
FAM78BQ5VT40 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 AP001582.1-201ENST00000525856 295 ntBASIC11.43□□□□□ -0.58
FAM78BQ5VT40 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 RARRES2P5-201ENST00000564013 466 ntBASIC11.43□□□□□ -0.58
FAM78BQ5VT40 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 AL662799.1-202ENST00000614205 422 ntBASIC11.43□□□□□ -0.58
FAM78BQ5VT40 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.43□□□□□ -0.58
FAM78BQ5VT40 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms