Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.5□□□□□ -0.25
RAE1P78406 BRD7P5-201ENST00000299197 1822 ntBASIC13.5□□□□□ -0.25
RAE1P78406 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.5□□□□□ -0.25
RAE1P78406 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
RAE1P78406 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.5□□□□□ -0.25
RAE1P78406 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
RAE1P78406 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 AC011742.3-201ENST00000439053 820 ntBASIC13.5□□□□□ -0.25
RAE1P78406 SERPINA13P-202ENST00000478994 924 ntBASIC13.5□□□□□ -0.25
RAE1P78406 RN7SL277P-201ENST00000481521 288 ntBASIC13.5□□□□□ -0.25
RAE1P78406 GOLGA2P8-201ENST00000505201 779 ntBASIC13.5□□□□□ -0.25
RAE1P78406 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.5□□□□□ -0.25
RAE1P78406 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.5□□□□□ -0.25
RAE1P78406 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.5□□□□□ -0.25
RAE1P78406 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.5□□□□□ -0.25
RAE1P78406 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RAE1P78406 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAE1P78406 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.5□□□□□ -0.25
RAE1P78406 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
RAE1P78406 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.5□□□□□ -0.25
RAE1P78406 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAE1P78406 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAE1P78406 LINC01165-201ENST00000445190 1623 ntBASIC13.5□□□□□ -0.25
RAE1P78406 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.49□□□□□ -0.25
RAE1P78406 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RAE1P78406 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.49□□□□□ -0.25
RAE1P78406 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RAE1P78406 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
RAE1P78406 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.49□□□□□ -0.25
RAE1P78406 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.49□□□□□ -0.25
RAE1P78406 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.49□□□□□ -0.25
RAE1P78406 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.49□□□□□ -0.25
RAE1P78406 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.49□□□□□ -0.25
RAE1P78406 EIF4HP1-201ENST00000453115 687 ntBASIC13.49□□□□□ -0.25
RAE1P78406 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.49□□□□□ -0.25
RAE1P78406 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.49□□□□□ -0.25
RAE1P78406 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.49□□□□□ -0.25
RAE1P78406 AC093752.3-201ENST00000567343 901 ntBASIC13.49□□□□□ -0.25
RAE1P78406 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.49□□□□□ -0.25
RAE1P78406 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.49□□□□□ -0.25
RAE1P78406 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.49□□□□□ -0.25
RAE1P78406 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.49□□□□□ -0.25
RAE1P78406 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.49□□□□□ -0.25
RAE1P78406 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAE1P78406 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms