Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AC018735.1-201ENST00000437208 1502 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 RCC2P1-201ENST00000452257 1476 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 LINC01815-202ENST00000641468 1409 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 AL590824.1-201ENST00000403828 1349 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AC009779.1-201ENST00000551138 283 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AL132994.2-201ENST00000603120 687 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 CR392039.2-201ENST00000623182 509 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 LINC00115-201ENST00000473798 1317 ntBASIC12.48□□□□□ -0.41
HIST1H3AP68431 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 AC104073.2-201ENST00000453737 312 ntBASIC12.48□□□□□ -0.41
HIST1H3AP68431 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 AL136295.7-201ENST00000619226 1200 ntBASIC12.48□□□□□ -0.41
HIST1H3AP68431 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 NCLP1-201ENST00000445357 1963 ntBASIC12.48□□□□□ -0.41
HIST1H3AP68431 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 FAM90A12P-201ENST00000519497 2375 ntBASIC12.48□□□□□ -0.41
HIST1H3AP68431 FAM90A24P-201ENST00000520792 2369 ntBASIC12.48□□□□□ -0.41
HIST1H3AP68431 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HIST1H3AP68431 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
HIST1H3AP68431 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 AC073548.1-201ENST00000624088 1882 ntBASIC12.47□□□□□ -0.41
HIST1H3AP68431 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms