Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.57□□□□□ -0.24
CLK1P49759 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.57□□□□□ -0.24
CLK1P49759 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.57□□□□□ -0.24
CLK1P49759 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.57□□□□□ -0.24
CLK1P49759 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLK1P49759 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 AC068760.1-201ENST00000493579 1953 ntBASIC13.56□□□□□ -0.24
CLK1P49759 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 MSTO2P-201ENST00000314835 1709 ntBASIC13.56□□□□□ -0.24
CLK1P49759 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLK1P49759 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLK1P49759 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC13.56□□□□□ -0.24
CLK1P49759 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 TPM3P8-201ENST00000330554 643 ntBASIC13.56□□□□□ -0.24
CLK1P49759 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
CLK1P49759 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.56□□□□□ -0.24
CLK1P49759 AC007969.1-201ENST00000433675 447 ntBASIC13.56□□□□□ -0.24
CLK1P49759 AC016694.1-201ENST00000434179 700 ntBASIC13.56□□□□□ -0.24
CLK1P49759 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CLK1P49759 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.56□□□□□ -0.24
CLK1P49759 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 MESTP3-201ENST00000503460 968 ntBASIC13.56□□□□□ -0.24
CLK1P49759 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.56□□□□□ -0.24
CLK1P49759 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.56□□□□□ -0.24
CLK1P49759 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CLK1P49759 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.56□□□□□ -0.24
CLK1P49759 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CLK1P49759 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CLK1P49759 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CLK1P49759 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.56□□□□□ -0.24
CLK1P49759 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.56□□□□□ -0.24
CLK1P49759 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 AC012617.1-204ENST00000586340 2305 ntBASIC13.56□□□□□ -0.24
CLK1P49759 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CLK1P49759 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CLK1P49759 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLK1P49759 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLK1P49759 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.55□□□□□ -0.24
CLK1P49759 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CLK1P49759 BOLA2P3-201ENST00000404566 256 ntBASIC13.55□□□□□ -0.24
CLK1P49759 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.55□□□□□ -0.24
CLK1P49759 RNA5SP486-201ENST00000515961 83 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms