Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
MMP13P45452 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP13P45452 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP13P45452 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
MMP13P45452 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP13P45452 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP13P45452 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.9□□□□□ -0.02
MMP13P45452 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.9□□□□□ -0.02
MMP13P45452 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP13P45452 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MMP13P45452 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
MMP13P45452 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP13P45452 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
MMP13P45452 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.89□□□□□ -0.03
MMP13P45452 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
MMP13P45452 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
MMP13P45452 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP13P45452 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.89□□□□□ -0.03
MMP13P45452 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.89□□□□□ -0.03
MMP13P45452 AL157407.1-201ENST00000435784 904 ntBASIC14.89□□□□□ -0.03
MMP13P45452 FAM58BP-201ENST00000439056 645 ntBASIC14.89□□□□□ -0.03
MMP13P45452 AL645933.1-201ENST00000440087 609 ntBASIC14.89□□□□□ -0.03
MMP13P45452 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.89□□□□□ -0.03
MMP13P45452 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.89□□□□□ -0.03
MMP13P45452 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.89□□□□□ -0.03
MMP13P45452 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP13P45452 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
MMP13P45452 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.89□□□□□ -0.03
MMP13P45452 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.89□□□□□ -0.03
MMP13P45452 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP13P45452 AL096828.3-201ENST00000615354 462 ntBASIC14.89□□□□□ -0.03
MMP13P45452 MIR6752-201ENST00000618442 71 ntBASIC14.89□□□□□ -0.03
MMP13P45452 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.89□□□□□ -0.03
MMP13P45452 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
MMP13P45452 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.89□□□□□ -0.03
MMP13P45452 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MMP13P45452 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MMP13P45452 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP13P45452 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MMP13P45452 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP13P45452 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.88□□□□□ -0.03
MMP13P45452 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP13P45452 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MMP13P45452 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP13P45452 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms