Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NCLP19338 LRRC59-203ENST00000576448 1531 ntBASIC17.16■□□□□ 0.34
NCLP19338 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC17.16■□□□□ 0.34
NCLP19338 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC17.16■□□□□ 0.34
NCLP19338 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC17.16■□□□□ 0.34
NCLP19338 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NCLP19338 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.16■□□□□ 0.34
NCLP19338 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.16■□□□□ 0.34
NCLP19338 AL442647.2-201ENST00000429864 857 ntBASIC17.16■□□□□ 0.34
NCLP19338 TTTY23B-201ENST00000442790 549 ntBASIC17.16■□□□□ 0.34
NCLP19338 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.16■□□□□ 0.34
NCLP19338 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.16■□□□□ 0.34
NCLP19338 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.16■□□□□ 0.34
NCLP19338 BRI3BPP1-201ENST00000594224 787 ntBASIC17.16■□□□□ 0.34
NCLP19338 AL359881.2-201ENST00000602973 570 ntBASIC17.16■□□□□ 0.34
NCLP19338 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.16■□□□□ 0.34
NCLP19338 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
NCLP19338 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NCLP19338 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.16■□□□□ 0.34
NCLP19338 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.16■□□□□ 0.34
NCLP19338 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC17.16■□□□□ 0.34
NCLP19338 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NCLP19338 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NCLP19338 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
NCLP19338 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NCLP19338 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NCLP19338 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.15■□□□□ 0.34
NCLP19338 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 AC079776.1-201ENST00000401540 1152 ntBASIC17.15■□□□□ 0.34
NCLP19338 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.15■□□□□ 0.34
NCLP19338 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 ATP5G2P4-201ENST00000442175 420 ntBASIC17.15■□□□□ 0.34
NCLP19338 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.15■□□□□ 0.34
NCLP19338 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NCLP19338 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NCLP19338 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.15■□□□□ 0.34
NCLP19338 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.15■□□□□ 0.34
NCLP19338 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
NCLP19338 AL008721.1-201ENST00000609964 604 ntBASIC17.15■□□□□ 0.34
NCLP19338 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 AC003102.2-201ENST00000589195 1469 ntBASIC17.15■□□□□ 0.34
NCLP19338 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC17.15■□□□□ 0.34
NCLP19338 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NCLP19338 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC17.14■□□□□ 0.34
NCLP19338 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NCLP19338 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
NCLP19338 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
NCLP19338 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC17.14■□□□□ 0.33
NCLP19338 AL591122.2-201ENST00000624125 1853 ntBASIC17.14■□□□□ 0.33
NCLP19338 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NCLP19338 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NCLP19338 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
NCLP19338 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC17.14■□□□□ 0.33
NCLP19338 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms