Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
COL4A3BPQ9Y5P4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL4A3BPQ9Y5P4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
COL4A3BPQ9Y5P4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 KRT8P19-201ENST00000551916 1455 ntBASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 AC116345.2-201ENST00000512837 523 ntBASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 AC140658.4-201ENST00000561990 352 ntBASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COL4A3BPQ9Y5P4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 FRMPD2B-201ENST00000431305 1347 ntBASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 AC007326.2-201ENST00000624224 7579 ntBASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 TMEM198B-204ENST00000484016 896 ntBASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 AC134698.3-201ENST00000523880 214 ntBASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 RTN3P1-201ENST00000536295 711 ntBASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 MIR4754-201ENST00000582477 89 ntBASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 MEG3_2.1-201ENST00000611456 105 ntBASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 AC079336.7-201ENST00000623428 1078 ntBASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
COL4A3BPQ9Y5P4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.97■□□□□ 0.15
COL4A3BPQ9Y5P4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms