Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC015802.1-201ENST00000588104 1449 ntBASIC15.17■□□□□ 0.02
CD248Q9HCU0 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.17■□□□□ 0.02
CD248Q9HCU0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
CD248Q9HCU0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 RN7SKP230-201ENST00000365642 335 ntBASIC15.16■□□□□ 0.02
CD248Q9HCU0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 RN7SL774P-201ENST00000577467 290 ntBASIC15.16■□□□□ 0.02
CD248Q9HCU0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AC091812.3-201ENST00000621362 345 ntBASIC15.16■□□□□ 0.02
CD248Q9HCU0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 AL137783.1-201ENST00000623494 1896 ntBASIC15.16■□□□□ 0.02
CD248Q9HCU0 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CD248Q9HCU0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CD248Q9HCU0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 AC010141.1-201ENST00000411585 623 ntBASIC15.15■□□□□ 0.02
CD248Q9HCU0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 IMP3P2-201ENST00000489760 475 ntBASIC15.15■□□□□ 0.02
CD248Q9HCU0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 AP001505.2-201ENST00000616815 443 ntBASIC15.15■□□□□ 0.02
CD248Q9HCU0 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms