Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 BNIP3P42-201ENST00000454982 569 ntBASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 AC140658.4-201ENST00000561990 352 ntBASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 BNIP3P29-201ENST00000598302 571 ntBASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 AC011447.5-201ENST00000616168 564 ntBASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 COX11-210ENST00000639671 696 ntBASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.06□□□□□ -0.32
RSPO3Q9BXY4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 RPL13AP3-202ENST00000494676 1473 ntBASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 AC026271.4-201ENST00000578214 1833 ntBASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 AC067930.6-201ENST00000623257 4947 ntBASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 POM121L10P-201ENST00000436994 1285 ntBASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 RPL13AP20-201ENST00000459725 609 ntBASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 FAM86HP-204ENST00000513466 959 ntBASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 AC009474.1-201ENST00000455096 1565 ntBASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.05□□□□□ -0.32
RSPO3Q9BXY4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms