Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC21.53■■□□□ 1.04
FYCO1Q9BQS8 OR6D1P-203ENST00000641209 4860 ntBASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 RHOC-205ENST00000369636 786 ntTSL 2 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 HLA-DPA2-205ENST00000433582 733 ntBASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 RPL3P5-201ENST00000441645 1232 ntBASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 GOLGA6L16P-201ENST00000441780 1299 ntBASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 RPL29P2-202ENST00000498671 657 ntBASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 AL513497.1-201ENST00000624273 2083 ntBASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 AC005089.1-201ENST00000619486 2241 ntBASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FYCO1Q9BQS8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
FYCO1Q9BQS8 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
FYCO1Q9BQS8 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC21.52■■□□□ 1.03
FYCO1Q9BQS8 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC21.52■■□□□ 1.03
FYCO1Q9BQS8 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC21.52■■□□□ 1.03
FYCO1Q9BQS8 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC21.52■■□□□ 1.03
FYCO1Q9BQS8 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC21.52■■□□□ 1.03
FYCO1Q9BQS8 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC21.52■■□□□ 1.03
FYCO1Q9BQS8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 INTS4P1-203ENST00000641008 3683 ntBASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 CROT-203ENST00000419147 2959 ntTSL 2 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 AL080243.1-201ENST00000423293 1060 ntBASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FYCO1Q9BQS8 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 NAA38-204ENST00000575208 529 ntTSL 3 BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FYCO1Q9BQS8 KRT8P24-201ENST00000560290 1559 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms