Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCDH19Q8TAB3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 SERPINA13P-202ENST00000478994 924 ntBASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 AC091804.1-201ENST00000486888 567 ntBASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 AC244452.3-201ENST00000636814 210 ntBASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDH19Q8TAB3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 AC126915.1-201ENST00000522847 1038 ntBASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDH19Q8TAB3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms