Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 RPL13AP3-202ENST00000494676 1473 ntBASIC15.34■□□□□ 0.05
BEST2Q8NFU1 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 TCAM1P-207ENST00000485295 1537 ntBASIC15.34■□□□□ 0.05
BEST2Q8NFU1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 CHCHD2P2-201ENST00000503744 321 ntBASIC15.34■□□□□ 0.05
BEST2Q8NFU1 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 SPCS2P2-201ENST00000603270 608 ntBASIC15.34■□□□□ 0.05
BEST2Q8NFU1 AC018635.2-201ENST00000608625 364 ntBASIC15.34■□□□□ 0.05
BEST2Q8NFU1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.34■□□□□ 0.05
BEST2Q8NFU1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
BEST2Q8NFU1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BEST2Q8NFU1 AC007191.1-201ENST00000623179 2995 ntBASIC15.33■□□□□ 0.05
BEST2Q8NFU1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BEST2Q8NFU1 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BEST2Q8NFU1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BEST2Q8NFU1 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.33■□□□□ 0.05
BEST2Q8NFU1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BEST2Q8NFU1 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
BEST2Q8NFU1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 MIR645-201ENST00000385283 94 ntBASIC15.33■□□□□ 0.04
BEST2Q8NFU1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 FTH1P22-201ENST00000456305 520 ntBASIC15.33■□□□□ 0.04
BEST2Q8NFU1 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 GOLGA2P8-201ENST00000505201 779 ntBASIC15.33■□□□□ 0.04
BEST2Q8NFU1 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 AC103810.10-201ENST00000606504 343 ntBASIC15.33■□□□□ 0.04
BEST2Q8NFU1 AC009560.1-201ENST00000620208 434 ntBASIC15.33■□□□□ 0.04
BEST2Q8NFU1 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 AC006480.2-201ENST00000609770 1337 ntBASIC15.33■□□□□ 0.04
BEST2Q8NFU1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms