Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 AC027237.1-201ENST00000560942 655 ntBASIC10.72□□□□□ -0.69
NUP35Q8NFH5 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 AL596442.2-201ENST00000610240 980 ntBASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.72□□□□□ -0.69
NUP35Q8NFH5 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
NUP35Q8NFH5 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 DDX12P-201ENST00000432996 2947 ntBASIC10.71□□□□□ -0.69
NUP35Q8NFH5 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 AC023274.1-201ENST00000418278 595 ntBASIC10.71□□□□□ -0.69
NUP35Q8NFH5 MED15P5-201ENST00000423150 992 ntBASIC10.71□□□□□ -0.69
NUP35Q8NFH5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 GIMAP3P-201ENST00000495150 836 ntBASIC10.71□□□□□ -0.69
NUP35Q8NFH5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.71□□□□□ -0.69
NUP35Q8NFH5 AC093813.1-201ENST00000605066 256 ntBASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms