Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 OR2R1P-201ENST00000441404 914 ntBASIC13.41□□□□□ -0.26
NUP43Q8NFH3 GOLGA2P4-201ENST00000441462 777 ntBASIC13.41□□□□□ -0.26
NUP43Q8NFH3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 KRT18P15-201ENST00000458108 1291 ntBASIC13.41□□□□□ -0.26
NUP43Q8NFH3 FAM86HP-204ENST00000513466 959 ntBASIC13.41□□□□□ -0.26
NUP43Q8NFH3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 BNIP3P13-201ENST00000599968 566 ntBASIC13.41□□□□□ -0.26
NUP43Q8NFH3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 AC092299.1-201ENST00000632679 757 ntBASIC13.41□□□□□ -0.26
NUP43Q8NFH3 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.41□□□□□ -0.26
NUP43Q8NFH3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 AC004899.1-201ENST00000424687 1714 ntBASIC13.41□□□□□ -0.26
NUP43Q8NFH3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 AL928654.5-201ENST00000624831 2501 ntBASIC13.41□□□□□ -0.26
NUP43Q8NFH3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 FAM90A12P-201ENST00000519497 2375 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 FAM90A24P-201ENST00000520792 2369 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 PTENP1-202ENST00000532280 3996 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 AC072061.1-201ENST00000569710 2234 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 HMGA1P1-201ENST00000415560 1062 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 XBP1P1-201ENST00000436573 652 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 VDAC1P1-201ENST00000439229 848 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 HLA-J-204ENST00000495278 958 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 AL583810.1-201ENST00000553344 1045 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 AC007663.3-201ENST00000609632 465 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 FAM90A7P-201ENST00000382628 1395 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 FAM90A23P-201ENST00000400136 1395 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 AC007952.5-201ENST00000572818 1486 ntBASIC13.4□□□□□ -0.26
NUP43Q8NFH3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NUP43Q8NFH3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms