Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 RN7SKP230-201ENST00000365642 335 ntBASIC13.5□□□□□ -0.25
LPCAT4Q643R3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AC026410.3-201ENST00000514280 936 ntBASIC13.5□□□□□ -0.25
LPCAT4Q643R3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AC022145.2-201ENST00000598203 171 ntBASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AC004466.1-201ENST00000599515 1080 ntBASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 AC104506.1-201ENST00000609247 429 ntBASIC13.5□□□□□ -0.25
LPCAT4Q643R3 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 PES1-205ENST00000405677 2708 ntTSL 2 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LPCAT4Q643R3 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 POLD2P1-201ENST00000511220 997 ntBASIC13.49□□□□□ -0.25
LPCAT4Q643R3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 AC009955.4-201ENST00000597192 544 ntBASIC13.49□□□□□ -0.25
LPCAT4Q643R3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 AL031432.4-201ENST00000641729 2190 ntBASIC13.49□□□□□ -0.25
LPCAT4Q643R3 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LPCAT4Q643R3 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LPCAT4Q643R3 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms