Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AC018529.2-202ENST00000611482 3087 ntBASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 AC107918.4-201ENST00000641966 3141 ntBASIC15.26■□□□□ 0.03
CTC1Q2NKJ3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 AC073869.2-201ENST00000417338 1026 ntBASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 INTS4P1-203ENST00000641008 3683 ntBASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.25■□□□□ 0.03
CTC1Q2NKJ3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 KRT8P28-201ENST00000433288 1390 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AL590440.2-201ENST00000641973 1595 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 PGAM1P12-201ENST00000505622 748 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC093826.1-201ENST00000508655 993 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AP000845.1-201ENST00000581677 2131 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 PEBP1P2-201ENST00000603980 558 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC006548.2-201ENST00000605217 529 ntBASIC15.24■□□□□ 0.03
CTC1Q2NKJ3 AC009145.4-201ENST00000625119 1294 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms